RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
General Information | |
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Locus Name | LOC_Os06g45820.1 View Network Show in Genome Browser |
Other Names | Os06g0669400 |
Description | OsFtsH2 FtsH protease, homologue of AtFtsH2/8, expressed |
Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 27724565-27728316 Nucleotide Length: 2031 |
Protein-coding | LOC_Os06g45820 |
Gene Ontology Classification | ||||
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GO | Name | Type | Code | |
GO:0009056 | catabolic process | Biological Process | IEA | |
GO:0016043 | cellular component organization | Biological Process | IEA | |
GO:0009987 | cellular process | Biological Process | IEA | |
GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
GO:0008152 | metabolic process | Biological Process | IEA | |
GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
GO:0015979 | photosynthesis | Biological Process | IEA | |
GO:0019538 | protein metabolic process | Biological Process | IEA | |
GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
GO:0005488 | binding | Molecular Function | IEA | |
GO:0016787 | hydrolase activity | Molecular Function | IEA | |
GO:0016020 | membrane | Cellular Component | IEA | |
GO:0009536 | plastid | Cellular Component | IEA | |
GO:0009579 | thylakoid | Cellular Component | IEA |
Regulatory Genes ( Show Network In Viewer ) | |
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Upstream Genes | LOC_Os02g16670 LOC_Os05g49230 LOC_Os03g60750 LOC_Os05g08950 LOC_Os03g62370 LOC_Os03g19990 LOC_Os02g44200 LOC_Os04g46730 LOC_Os02g47850 LOC_Os01g62420 LOC_Os01g38970 More.. |
Downstream Genes | LOC_Os07g42632 LOC_Os06g49140 LOC_Os09g27270 LOC_Os10g36860 LOC_Os06g51029 LOC_Os07g09720 LOC_Os07g44410 LOC_Os09g36450 LOC_Os08g44210 LOC_Os09g38759 LOC_Os10g41780 More.. |
Pathways | |
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KEGG Pathways | rn00860 rn01100 rn01110 |
Metacyc Pathways | CHLOROPHYLL-SYN |
Database Links | |
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Gramene | LOC_Os06g45820.1 |
Rice Genome Annotation | LOC_Os06g45820.1 |
Ricechip | LOC_Os06g45820.1 |
KEGG | osa:4341796 dosa:Os06t0669400-01 |
Entrez-Gene | 4341796 |