RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g45900.1 View Network Show in Genome Browser |
| Other Names | Os06g0670400 |
| Description | peptidyl-prolyl cis-trans isomerase-like 4, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 27782932-27791010 Nucleotide Length: 1647 |
| Protein-coding | LOC_Os06g45900 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g30140 LOC_Os05g05860 LOC_Os05g02880 LOC_Os03g25770 LOC_Os03g24890 LOC_Os03g22380 LOC_Os03g17710 LOC_Os02g15310 |
| Downstream Genes | LOC_Os12g38430 LOC_Os07g47630 LOC_Os07g43950 LOC_Os07g43050 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g45900.1 |
| Rice Genome Annotation | LOC_Os06g45900.1 |
| Ricechip | LOC_Os06g45900.1 |
| KEGG | dosa:Os06t0670400-00 |