RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g45980.1 View Network Show in Genome Browser |
| Other Names | Os06g0671700 |
| Description | toprim domain-containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 27866741-27874406 Nucleotide Length: 2172 |
| Protein-coding | LOC_Os06g45980 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| IEA | ||||
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g06900 LOC_Os06g16980 LOC_Os02g57670 LOC_Os05g45270 LOC_Os02g10640 LOC_Os01g39250 LOC_Os02g19150 LOC_Os03g05730 LOC_Os05g38400 LOC_Os06g40560 LOC_Os01g39260 More.. |
| Downstream Genes | LOC_Os09g32450 LOC_Os11g20790 LOC_Os12g13380 LOC_Os10g30580 LOC_Os12g37610 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00521 rn00524 rn01110 rn00520 rn00051 rn00052 rn00010 rn01100 rn01120 rn00500 |
| Metacyc Pathways | P124-PWY PWY-6693 PWY-6531 PWY-842 PWY-621 P122-PWY SUCUTIL-PWY PWY-5384 PWY-3801 MANGDPMET-PWY MANNCAT-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g45980.1 |
| Rice Genome Annotation | LOC_Os06g45980.1 |
| Ricechip | LOC_Os06g45980.1 |
| KEGG | osa:4341808 dosa:Os06t0671700-01 |
| Entrez-Gene | 4341808 |