RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g45990.2 View Network Show in Genome Browser |
| Other Names | Os06g0671800 |
| Description | patellin-5, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 27875114-27877420 Nucleotide Length: 1353 |
| Protein-coding | LOC_Os06g45990 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g10760 LOC_Os05g24020 LOC_Os03g53310 LOC_Os05g39050 LOC_Os05g02310 LOC_Os03g56820 LOC_Os01g52770 LOC_Os02g48360 LOC_Os03g17760 |
| Downstream Genes | LOC_Os08g42050 LOC_Os07g43890 LOC_Os07g42420 LOC_Os12g42230 LOC_Os11g47820 LOC_Os08g42040 LOC_Os10g25780 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g45990.2 |
| Rice Genome Annotation | LOC_Os06g45990.2 |
| Ricechip | LOC_Os06g45990.2 |
| KEGG | osa:4341809 dosa:Os06t0671800-01 |
| Entrez-Gene | 4341809 |