RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g46270.1 View Network Show in Genome Browser |
| Other Names | Os06g0675600 |
| Description | no apical meristem protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 28037569-28041909 Nucleotide Length: 915 |
| Protein-coding | LOC_Os06g46270 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g24430 LOC_Os02g07240 |
| Downstream Genes | LOC_Os11g05100 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR164d osa-miR164a osa-miR164b osa-miR164f osa-miR164c osa-miR164e |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g46270.1 |
| Rice Genome Annotation | LOC_Os06g46270.1 |
| Ricechip | LOC_Os06g46270.1 |
| KEGG | osa:4341823 dosa:Os06t0675600-01 |
| Entrez-Gene | 4341823 |