RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g46340.1 View Network Show in Genome Browser |
| Other Names | Os06g0676700 |
| Description | glycosyl hydrolase, family 31, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 28100801-28106083 Nucleotide Length: 2661 |
| Protein-coding | LOC_Os06g46340 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g05760 LOC_Os05g13300 LOC_Os06g14190 |
| Downstream Genes | LOC_Os08g03390 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00052 rn01100 rn00500 |
| Metacyc Pathways | GLYCOCAT-PWY PWY-842 SUCUTIL-PWY PWY-621 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g46340.1 |
| Rice Genome Annotation | LOC_Os06g46340.1 |
| Ricechip | LOC_Os06g46340.1 |
| KEGG | osa:4341833 dosa:Os06t0676700-01 |
| Entrez-Gene | 4341833 |