RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g46372.2 View Network Show in Genome Browser |
| Other Names | Os06g0677400 |
| Description | dehydrogenase, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 28139204-28142552 Nucleotide Length: 1008 |
| Protein-coding | LOC_Os06g46372 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g39344 LOC_Os01g54860 LOC_Os05g23620 LOC_Os03g07570 LOC_Os01g70960 LOC_Os06g02144 LOC_Os04g20280 LOC_Os01g05694 LOC_Os02g32120 LOC_Os05g35730 LOC_Os02g41590 More.. |
| Downstream Genes | LOC_Os11g20790 LOC_Os12g13380 LOC_Os12g16350 LOC_Os10g42220 LOC_Os10g40540 LOC_Os10g42210 LOC_Os07g09060 LOC_Os12g43630 LOC_Os07g15880 LOC_Os11g26850 LOC_Os11g05570 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g46372.2 |
| Rice Genome Annotation | LOC_Os06g46372.2 |
| Ricechip | LOC_Os06g46372.2 |
| KEGG | osa:9268115 dosa:Os06t0677400-01 |
| Entrez-Gene | 9268115 |