RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g46390.1 View Network Show in Genome Browser |
| Other Names | Os06g0677600 |
| Description | LSM domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 28148939-28149789 Nucleotide Length: 351 |
| Protein-coding | LOC_Os06g46390 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g32310 LOC_Os04g39444 LOC_Os04g36810 LOC_Os03g29740 LOC_Os02g30624 LOC_Os02g08090 LOC_Os02g03440 LOC_Os02g01250 LOC_Os01g64690 LOC_Os01g15310 LOC_Os03g13760 More.. |
| Downstream Genes | LOC_Os08g08040 LOC_Os08g05530 LOC_Os11g43620 LOC_Os07g41790 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g46390.1 |
| Rice Genome Annotation | LOC_Os06g46390.1 |
| Ricechip | LOC_Os06g46390.1 |
| KEGG | osa:4341839 dosa:Os06t0677600-01 |
| Entrez-Gene | 4341839 |