RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g46434.1 View Network Show in Genome Browser |
| Other Names | |
| Description | cytochrome c biogenesis protein ccsA, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 28180529-28181494 Nucleotide Length: 966 |
| Protein-coding | LOC_Os06g46434 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g55970 LOC_Os02g17520 LOC_Os04g53550 LOC_Os02g49870 LOC_Os04g33830 LOC_Os02g32030 LOC_Os03g55720 LOC_Os04g02820 LOC_Os01g17170 LOC_Os04g38600 LOC_Os01g54870 More.. |
| Downstream Genes | LOC_Os10g39870 LOC_Os07g32880 LOC_Os07g28610 LOC_Os07g04840 LOC_Os08g02630 LOC_Os11g26850 LOC_Os07g49400 LOC_Os12g38000 LOC_Os10g35840 LOC_Os10g41410 LOC_Os07g42450 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g46434.1 |
| Rice Genome Annotation | LOC_Os06g46434.1 |
| Ricechip | LOC_Os06g46434.1 |