RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g46990.1 View Network Show in Genome Browser |
| Other Names | Os06g0683900 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 28495278-28497331 Nucleotide Length: 1296 |
| Protein-coding | LOC_Os06g46990 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g70560 LOC_Os04g41900 LOC_Os02g15810 LOC_Os03g46920 LOC_Os04g15800 LOC_Os05g33030 LOC_Os03g17960 LOC_Os01g59120 LOC_Os03g39020 LOC_Os03g06350 LOC_Os03g06670 More.. |
| Downstream Genes | LOC_Os07g32390 LOC_Os08g44420 LOC_Os08g44410 LOC_Os12g02710 LOC_Os11g02740 LOC_Os11g37100 LOC_Os09g36740 LOC_Os08g40170 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g46990.1 |
| Rice Genome Annotation | LOC_Os06g46990.1 |
| Ricechip | LOC_Os06g46990.1 |
| KEGG | osa:4341875 dosa:Os06t0683900-01 |
| Entrez-Gene | 4341875 |