RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g47000.3 View Network Show in Genome Browser |
| Other Names | Os06g0684000 |
| Description | external NADH-ubiquinone oxidoreductase 1, mitochondrial precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 28504138-28508808 Nucleotide Length: 1401 |
| Protein-coding | LOC_Os06g47000 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g34770 LOC_Os01g04260 LOC_Os03g55150 LOC_Os03g29170 LOC_Os02g32120 LOC_Os03g56800 LOC_Os04g14790 LOC_Os03g02710 LOC_Os04g32660 LOC_Os02g49270 LOC_Os02g10640 More.. |
| Downstream Genes | LOC_Os08g43170 LOC_Os07g40580 LOC_Os12g32240 LOC_Os09g07830 LOC_Os07g02210 LOC_Os09g34960 LOC_Os10g37420 LOC_Os11g07500 LOC_Os07g10600 LOC_Os09g37860 LOC_Os07g08330 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g47000.3 |
| Rice Genome Annotation | LOC_Os06g47000.3 |
| Ricechip | LOC_Os06g47000.3 |
| KEGG | osa:4341876 dosa:Os06t0684000-02 |
| Entrez-Gene | 4341876 |