RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g47260.1 View Network Show in Genome Browser |
| Other Names | Os06g0687100 |
| Description | ras-related protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 28651070-28652604 Nucleotide Length: 633 |
| Protein-coding | LOC_Os06g47260 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005768 | endosome | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g24134 LOC_Os05g49890 LOC_Os05g23860 LOC_Os05g34540 LOC_Os06g10650 LOC_Os03g16900 LOC_Os01g12730 LOC_Os02g06490 LOC_Os05g44050 LOC_Os02g47440 LOC_Os01g04840 More.. |
| Downstream Genes | LOC_Os08g42000 LOC_Os07g16970 LOC_Os07g41180 LOC_Os07g09680 LOC_Os08g25060 LOC_Os07g13530 LOC_Os09g05020 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g47260.1 |
| Rice Genome Annotation | LOC_Os06g47260.1 |
| Ricechip | LOC_Os06g47260.1 |
| KEGG | osa:4341888 dosa:Os06t0687100-01 |
| Entrez-Gene | 4341888 |