RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g47300.2 View Network Show in Genome Browser |
| Other Names | Os06g0687500 |
| Description | RNA recognition motif containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 28670204-28674844 Nucleotide Length: 693 |
| Protein-coding | LOC_Os06g47300 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g02680 LOC_Os04g52200 LOC_Os03g60930 LOC_Os03g63730 LOC_Os04g48750 LOC_Os03g58720 LOC_Os03g01850 LOC_Os03g45410 LOC_Os01g21940 LOC_Os04g52400 LOC_Os02g13110 More.. |
| Downstream Genes | LOC_Os10g02630 LOC_Os08g31810 LOC_Os11g40510 LOC_Os12g39070 LOC_Os07g31140 LOC_Os11g41890 LOC_Os07g42380 LOC_Os11g04950 LOC_Os12g04940 LOC_Os08g40880 LOC_Os07g39560 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2104 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g47300.2 |
| Rice Genome Annotation | LOC_Os06g47300.2 |
| Ricechip | LOC_Os06g47300.2 |
| KEGG | osa:4341891 dosa:Os06t0687500-01 |
| Entrez-Gene | 4341891 |