RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g47350.1 View Network Show in Genome Browser |
| Other Names | Os06g0688100 |
| Description | RNA polymerase I specific transcription initiation factor RRN3 family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 28699601-28706489 Nucleotide Length: 1869 |
| Protein-coding | LOC_Os06g47350 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g32600 LOC_Os04g42990 LOC_Os03g52750 LOC_Os02g03340 LOC_Os03g18410 LOC_Os06g07480 LOC_Os01g48930 LOC_Os01g34614 LOC_Os05g05260 LOC_Os01g49680 LOC_Os02g15810 More.. |
| Downstream Genes | LOC_Os10g35290 LOC_Os11g28350 LOC_Os12g09280 LOC_Os08g25060 LOC_Os06g48230 LOC_Os07g01450 LOC_Os07g44190 LOC_Os11g05562 LOC_Os08g43170 LOC_Os09g12310 LOC_Os08g44480 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g47350.1 |
| Rice Genome Annotation | LOC_Os06g47350.1 |
| Ricechip | LOC_Os06g47350.1 |
| KEGG | osa:4341897 dosa:Os06t0688100-02 |
| Entrez-Gene | 4341897 |