RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g47580.3 View Network Show in Genome Browser |
| Other Names | Os06g0691000 |
| Description | REV1, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 28806781-28816144 Nucleotide Length: 3306 |
| Protein-coding | LOC_Os06g47580 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g05190 LOC_Os01g71256 LOC_Os04g43300 LOC_Os01g55300 LOC_Os06g13020 LOC_Os03g42010 LOC_Os04g35060 |
| Downstream Genes | LOC_Os11g08660 LOC_Os07g49010 LOC_Os08g31930 LOC_Os11g31890 LOC_Os09g26870 LOC_Os11g40510 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g47580.3 |
| Rice Genome Annotation | LOC_Os06g47580.3 |
| Ricechip | LOC_Os06g47580.3 |
| KEGG | osa:4341904 dosa:Os06t0691000-01 |
| Entrez-Gene | 4341904 |