RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g48180.1 View Network Show in Genome Browser |
| Other Names | Os06g0696600 |
| Description | glycosyl hydrolases family 16, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 29144888-29146562 Nucleotide Length: 867 |
| Protein-coding | LOC_Os06g48180 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g22919 LOC_Os02g17900 LOC_Os02g17880 |
| Downstream Genes | LOC_Os10g02630 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5809 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g48180.1 |
| Rice Genome Annotation | LOC_Os06g48180.1 |
| Ricechip | LOC_Os06g48180.1 |
| KEGG | osa:4341942 dosa:Os06t0696600-01 |
| Entrez-Gene | 4341942 |