RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g48590.2 View Network Show in Genome Browser |
| Other Names | Os06g0699400 |
| Description | CGMC_MAPKCMGC_2_SLT2y_ERK.2 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 29398895-29402631 Nucleotide Length: 1110 |
| Protein-coding | LOC_Os06g48590 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0004871 | signal transducer activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g05520 LOC_Os04g56450 LOC_Os04g37904 LOC_Os06g33549 LOC_Os02g05630 LOC_Os06g48300 LOC_Os01g32660 LOC_Os06g33530 LOC_Os02g15594 LOC_Os02g55560 LOC_Os02g15810 More.. |
| Downstream Genes | LOC_Os10g39540 LOC_Os07g32380 LOC_Os08g30590 LOC_Os10g42950 LOC_Os12g12860 LOC_Os07g44710 LOC_Os09g20640 LOC_Os12g06200 LOC_Os11g35500 LOC_Os10g03400 LOC_Os08g25310 More.. |
| Reference | |
|---|---|
| PubMed | 21081102 16673940 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g48590.2 |
| Rice Genome Annotation | LOC_Os06g48590.2 |
| Ricechip | LOC_Os06g48590.2 |
| KEGG | osa:4341956 dosa:Os06t0699400-01 |
| Entrez-Gene | 4341956 |