RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g48600.1 View Network Show in Genome Browser |
| Other Names | Os06g0699500 |
| Description | macrophage migration inhibitory factor, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 29402705-29403741 Nucleotide Length: 348 |
| Protein-coding | LOC_Os06g48600 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g56070 LOC_Os03g25960 LOC_Os04g52130 LOC_Os05g51700 LOC_Os02g02570 LOC_Os02g43600 LOC_Os01g05060 LOC_Os06g04150 LOC_Os05g35540 LOC_Os02g01510 LOC_Os03g03770 More.. |
| Downstream Genes | LOC_Os08g39070 LOC_Os08g34010 LOC_Os08g01054 LOC_Os07g46180 LOC_Os09g24820 LOC_Os07g44630 LOC_Os11g03890 LOC_Os10g41520 LOC_Os08g10570 LOC_Os11g29380 LOC_Os08g23730 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g48600.1 |
| Rice Genome Annotation | LOC_Os06g48600.1 |
| Ricechip | LOC_Os06g48600.1 |
| KEGG | osa:4341957 dosa:Os06t0699500-01 |
| Entrez-Gene | 4341957 |