RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g48780.1 View Network Show in Genome Browser |
| Other Names | Os06g0701400 |
| Description | 60S acidic ribosomal protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 29527352-29528953 Nucleotide Length: 360 |
| Protein-coding | LOC_Os06g48780 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g19840 LOC_Os04g50990 LOC_Os05g28750 LOC_Os02g54470 LOC_Os05g48310 LOC_Os02g33140 LOC_Os03g54890 LOC_Os03g22950 LOC_Os05g48220 LOC_Os01g13080 LOC_Os01g42650 More.. |
| Downstream Genes | LOC_Os07g20580 LOC_Os08g02410 LOC_Os08g10608 LOC_Os08g02400 LOC_Os07g12250 LOC_Os07g33997 LOC_Os07g33921 LOC_Os07g33898 LOC_Os07g26740 LOC_Os07g08330 LOC_Os09g08430 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g48780.1 |
| Rice Genome Annotation | LOC_Os06g48780.1 |
| Ricechip | LOC_Os06g48780.1 |
| KEGG | osa:4341969 dosa:Os06t0701400-01 |
| Entrez-Gene | 4341969 |