RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g49110.1 View Network Show in Genome Browser |
| Other Names | Os06g0704600 |
| Description | delta-aminolevulinic acid dehydratase, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 29757045-29761643 Nucleotide Length: 1281 |
| Protein-coding | LOC_Os06g49110 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g07230 LOC_Os03g12900 LOC_Os03g12910 LOC_Os01g52770 LOC_Os02g08380 LOC_Os01g02080 LOC_Os03g03360 LOC_Os06g21530 LOC_Os03g22780 LOC_Os05g31280 LOC_Os03g08730 More.. |
| Downstream Genes | LOC_Os12g34890 LOC_Os08g38720 LOC_Os07g18750 LOC_Os10g18220 LOC_Os11g48020 LOC_Os07g01150 LOC_Os11g35390 LOC_Os10g41150 LOC_Os07g10600 LOC_Os10g35644 LOC_Os10g35840 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00860 rn01100 rn01110 |
| Metacyc Pathways | PWY-5188 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g49110.1 |
| Rice Genome Annotation | LOC_Os06g49110.1 |
| Ricechip | LOC_Os06g49110.1 |
| KEGG | osa:4341997 dosa:Os06t0704600-01 |
| Entrez-Gene | 4341997 |