RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g49120.1 View Network Show in Genome Browser |
| Other Names | Os06g0704700 |
| Description | Complex I intermediate-associated protein 30 domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 29762519-29766745 Nucleotide Length: 1947 |
| Protein-coding | LOC_Os06g49120 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0015979 | photosynthesis | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g30250 LOC_Os04g36720 LOC_Os06g44270 LOC_Os06g04620 LOC_Os02g57180 LOC_Os03g29170 LOC_Os04g10010 LOC_Os03g18740 LOC_Os02g57990 LOC_Os03g16980 LOC_Os03g17000 More.. |
| Downstream Genes | LOC_Os11g44810 LOC_Os11g26890 LOC_Os07g49120 LOC_Os12g01449 LOC_Os11g01439 LOC_Os08g28730 LOC_Os09g15420 LOC_Os11g11000 LOC_Os09g39680 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g49120.1 |
| Rice Genome Annotation | LOC_Os06g49120.1 |
| Ricechip | LOC_Os06g49120.1 |
| KEGG | osa:4341998 dosa:Os06t0704700-01 |
| Entrez-Gene | 4341998 |