RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g49160.1 View Network Show in Genome Browser |
| Other Names | Os06g0705100 |
| Description | thylakoid lumenal 16.5 kDa protein, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 29789098-29790677 Nucleotide Length: 720 |
| Protein-coding | LOC_Os06g49160 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g62630 LOC_Os05g41190 LOC_Os02g04460 LOC_Os03g12020 LOC_Os02g05890 LOC_Os01g59060 LOC_Os03g21560 LOC_Os05g27100 LOC_Os03g08080 LOC_Os01g73540 LOC_Os01g25600 More.. |
| Downstream Genes | LOC_Os10g37180 LOC_Os07g28610 LOC_Os07g41630 LOC_Os10g10170 LOC_Os07g11110 LOC_Os08g42850 LOC_Os10g35810 LOC_Os08g29370 LOC_Os08g34270 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g49160.1 |
| Rice Genome Annotation | LOC_Os06g49160.1 |
| Ricechip | LOC_Os06g49160.1 |
| KEGG | osa:4342001 dosa:Os06t0705100-01 |
| Entrez-Gene | 4342001 |