RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g49480.2 View Network Show in Genome Browser |
| Other Names | Os06g0708500 |
| Description | peptidyl-prolyl cis-trans isomerase, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 29973886-29976322 Nucleotide Length: 663 |
| Protein-coding | LOC_Os06g49480 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g36730 LOC_Os02g08180 LOC_Os02g48110 LOC_Os03g13170 LOC_Os01g38510 LOC_Os03g14990 LOC_Os05g36070 LOC_Os03g05520 LOC_Os05g06440 LOC_Os03g08624 LOC_Os03g53800 More.. |
| Downstream Genes | LOC_Os11g09280 LOC_Os09g19734 LOC_Os08g17680 LOC_Os06g50154 LOC_Os07g08430 LOC_Os07g14270 LOC_Os07g10830 LOC_Os11g38990 LOC_Os07g48244 LOC_Os08g29370 LOC_Os07g37830 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g49480.2 |
| Rice Genome Annotation | LOC_Os06g49480.2 |
| Ricechip | LOC_Os06g49480.2 |
| KEGG | osa:4342022 dosa:Os06t0708500-01 |
| Entrez-Gene | 4342022 |