RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g49520.1 View Network Show in Genome Browser |
| Other Names | Os06g0709000 |
| Description | arogenate dehydrogenase 1, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 29994592-29996123 Nucleotide Length: 1155 |
| Protein-coding | LOC_Os06g49520 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g42350 LOC_Os06g45930 LOC_Os04g55780 LOC_Os01g60790 LOC_Os04g37580 LOC_Os02g26700 LOC_Os01g61380 LOC_Os02g29400 LOC_Os04g33390 LOC_Os03g17730 LOC_Os02g19770 More.. |
| Downstream Genes | LOC_Os08g33720 LOC_Os07g32774 LOC_Os07g49390 LOC_Os10g37980 LOC_Os09g39260 LOC_Os09g39230 LOC_Os08g41290 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g49520.1 |
| Rice Genome Annotation | LOC_Os06g49520.1 |
| Ricechip | LOC_Os06g49520.1 |
| KEGG | osa:4342026 dosa:Os06t0709000-01 |
| Entrez-Gene | 4342026 |