RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g49800.1 View Network Show in Genome Browser |
| Other Names | Os06g0712400 |
| Description | ubiquitin interaction motif family protein, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 30128197-30134097 Nucleotide Length: 2187 |
| Protein-coding | LOC_Os06g49800 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g51650 LOC_Os04g55500 LOC_Os03g57870 LOC_Os01g57570 LOC_Os02g02840 LOC_Os01g64650 LOC_Os05g42190 LOC_Os02g58730 LOC_Os05g25310 LOC_Os02g20850 LOC_Os02g50860 More.. |
| Downstream Genes | LOC_Os08g04460 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g49800.1 |
| Rice Genome Annotation | LOC_Os06g49800.1 |
| Ricechip | LOC_Os06g49800.1 |
| KEGG | osa:4342044 dosa:Os06t0712400-01 |
| Entrez-Gene | 4342044 |