RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g49890.1 View Network Show in Genome Browser |
| Other Names | Os06g0713100 |
| Description | coiled-coil domain-containing protein 90A, mitochondrial precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 30202970-30207141 Nucleotide Length: 672 |
| Protein-coding | LOC_Os06g49890 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g36160 LOC_Os02g13530 LOC_Os01g52490 LOC_Os03g12520 LOC_Os06g14670 LOC_Os02g46320 LOC_Os05g51680 LOC_Os03g52400 |
| Downstream Genes | LOC_Os07g32390 LOC_Os12g03822 LOC_Os11g03990 LOC_Os07g40740 LOC_Os07g36420 LOC_Os08g10570 LOC_Os11g40140 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g49890.1 |
| Rice Genome Annotation | LOC_Os06g49890.1 |
| Ricechip | LOC_Os06g49890.1 |
| KEGG | osa:4342051 dosa:Os06t0713100-01 |
| Entrez-Gene | 4342051 |