RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g49990.2 View Network Show in Genome Browser |
| Other Names | Os06g0714000 |
| Description | UPF0183 protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 30274473-30279002 Nucleotide Length: 1281 |
| Protein-coding | LOC_Os06g49990 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| IEA | ||||
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g59800 LOC_Os01g63250 LOC_Os05g13950 LOC_Os02g48380 LOC_Os03g01970 LOC_Os01g66560 LOC_Os05g05210 LOC_Os04g52280 LOC_Os04g54630 LOC_Os03g61130 LOC_Os02g27110 More.. |
| Downstream Genes | LOC_Os12g31380 LOC_Os08g02350 LOC_Os08g23360 LOC_Os10g29470 LOC_Os09g33970 LOC_Os07g42900 LOC_Os11g45590 LOC_Os08g16910 LOC_Os12g35290 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5809 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g49990.2 |
| Rice Genome Annotation | LOC_Os06g49990.2 |
| Ricechip | LOC_Os06g49990.2 |
| KEGG | osa:4342057 dosa:Os06t0714000-01 |
| Entrez-Gene | 4342057 |