RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g50000.2 View Network Show in Genome Browser |
| Other Names | Os06g0714100 |
| Description | LYR motif containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 30281154-30281770 Nucleotide Length: 261 |
| Protein-coding | LOC_Os06g50000 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g43850 LOC_Os02g32120 LOC_Os01g49190 LOC_Os03g50540 LOC_Os01g61380 LOC_Os01g46070 LOC_Os03g59220 LOC_Os04g32660 LOC_Os05g47980 LOC_Os01g22520 LOC_Os03g18420 More.. |
| Downstream Genes | LOC_Os07g44650 LOC_Os10g17280 LOC_Os08g14070 LOC_Os10g26640 LOC_Os07g39710 LOC_Os08g33720 LOC_Os08g17650 LOC_Os10g42840 LOC_Os07g10500 LOC_Os09g08910 LOC_Os07g45090 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g50000.2 |
| Rice Genome Annotation | LOC_Os06g50000.2 |
| Ricechip | LOC_Os06g50000.2 |
| KEGG | osa:4342058 dosa:Os06t0714100-01 |
| Entrez-Gene | 4342058 |