RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g50050.1 View Network Show in Genome Browser |
| Other Names | Os06g0714500 |
| Description | AAA-type ATPase family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 30332479-30336110 Nucleotide Length: 1182 |
| Protein-coding | LOC_Os06g50050 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g48820 LOC_Os01g74000 LOC_Os02g55970 LOC_Os02g07900 LOC_Os02g26814 LOC_Os02g08480 LOC_Os04g27060 LOC_Os04g26910 LOC_Os02g11050 LOC_Os06g03940 LOC_Os01g42850 More.. |
| Downstream Genes | LOC_Os12g13320 LOC_Os09g10820 LOC_Os09g33980 LOC_Os07g25420 LOC_Os08g09270 LOC_Os12g24320 LOC_Os12g33100 LOC_Os07g43170 LOC_Os08g01770 LOC_Os11g20790 LOC_Os12g13380 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g50050.1 |
| Rice Genome Annotation | LOC_Os06g50050.1 |
| Ricechip | LOC_Os06g50050.1 |
| KEGG | osa:4342062 dosa:Os06t0714500-01 |
| Entrez-Gene | 4342062 |