RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g50154.1 View Network Show in Genome Browser |
| Other Names | Os06g0715500 |
| Description | translocon-associated protein subunit alpha precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 30371093-30374533 Nucleotide Length: 774 |
| Protein-coding | LOC_Os06g50154 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g49480 LOC_Os03g14990 LOC_Os06g44910 LOC_Os02g08180 LOC_Os04g40950 LOC_Os05g36070 LOC_Os03g36730 LOC_Os01g38510 LOC_Os01g68324 LOC_Os06g48750 LOC_Os02g05330 More.. |
| Downstream Genes | LOC_Os07g48244 LOC_Os11g09280 LOC_Os09g38530 LOC_Os08g02410 LOC_Os07g42960 LOC_Os08g39500 LOC_Os07g10830 LOC_Os10g41410 LOC_Os07g42950 LOC_Os08g02400 LOC_Os08g03640 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g50154.1 |
| Rice Genome Annotation | LOC_Os06g50154.1 |
| Ricechip | LOC_Os06g50154.1 |
| KEGG | osa:4342072 dosa:Os06t0715500-01 |
| Entrez-Gene | 4342072 |