RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g50880.1 View Network Show in Genome Browser |
| Other Names | Os06g0724500 |
| Description | WD domain, G-beta repeat domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 30776898-30779652 Nucleotide Length: 1557 |
| Protein-coding | LOC_Os06g50880 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g42770 LOC_Os01g44394 LOC_Os04g14760 LOC_Os04g51110 LOC_Os02g11830 LOC_Os06g44030 LOC_Os05g44320 LOC_Os01g08190 LOC_Os02g11060 LOC_Os03g47780 LOC_Os03g03150 More.. |
| Downstream Genes | LOC_Os08g04270 LOC_Os07g12320 LOC_Os10g32880 LOC_Os07g14830 LOC_Os09g06680 LOC_Os08g18150 LOC_Os07g40030 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR414 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g50880.1 |
| Rice Genome Annotation | LOC_Os06g50880.1 |
| Ricechip | LOC_Os06g50880.1 |
| KEGG | osa:4342101 dosa:Os06t0724500-01 |
| Entrez-Gene | 4342101 |