RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g50890.1 View Network Show in Genome Browser |
| Other Names | Os06g0724600 |
| Description | RNA recognition motif containing protein, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 30779924-30783639 Nucleotide Length: 948 |
| Protein-coding | LOC_Os06g50890 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g71200 LOC_Os02g52140 LOC_Os04g54440 LOC_Os05g30980 LOC_Os06g20010 LOC_Os01g65550 LOC_Os01g16090 LOC_Os06g41790 LOC_Os03g07800 LOC_Os01g72834 LOC_Os02g51890 More.. |
| Downstream Genes | LOC_Os11g45590 LOC_Os08g37700 LOC_Os08g45240 LOC_Os07g33330 LOC_Os11g41820 LOC_Os08g40880 LOC_Os09g03610 LOC_Os11g40510 LOC_Os12g43600 LOC_Os08g09100 LOC_Os08g38410 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g50890.1 |
| Rice Genome Annotation | LOC_Os06g50890.1 |
| Ricechip | LOC_Os06g50890.1 |
| KEGG | osa:4342102 dosa:Os06t0724600-02 |
| Entrez-Gene | 4342102 |