RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g51060.1 View Network Show in Genome Browser |
| Other Names | Os06g0726200 |
| Description | CHIT8 - Chitinase family protein precursor, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 30890711-30892066 Nucleotide Length: 1050 |
| Protein-coding | LOC_Os06g51060 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g51050 LOC_Os05g37190 LOC_Os06g44370 LOC_Os06g29730 LOC_Os05g45590 LOC_Os06g39120 LOC_Os05g02510 |
| Downstream Genes | LOC_Os07g32060 LOC_Os10g31330 LOC_Os08g29570 LOC_Os10g28080 LOC_Os12g36880 LOC_Os07g25590 LOC_Os12g36850 LOC_Os12g18110 LOC_Os10g41999 LOC_Os07g31884 LOC_Os10g41980 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00520 rn01110 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g51060.1 |
| Rice Genome Annotation | LOC_Os06g51060.1 |
| Ricechip | LOC_Os06g51060.1 |
| KEGG | osa:4342115 dosa:Os06t0726200-02 |
| Entrez-Gene | 4342115 |