RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g51250.1 View Network Show in Genome Browser |
| Other Names | Os06g0728600 |
| Description | EF hand family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 31013731-31021754 Nucleotide Length: 3567 |
| Protein-coding | LOC_Os06g51250 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g41210 LOC_Os03g20370 LOC_Os01g16240 LOC_Os01g17190 LOC_Os02g55880 LOC_Os03g59590 LOC_Os01g59530 LOC_Os01g22990 LOC_Os03g16110 LOC_Os01g62570 LOC_Os02g56270 More.. |
| Downstream Genes | LOC_Os07g48780 LOC_Os11g43640 LOC_Os08g28190 LOC_Os12g03816 LOC_Os11g06390 LOC_Os09g28590 LOC_Os09g10720 LOC_Os07g38240 LOC_Os10g36650 LOC_Os08g36980 LOC_Os07g25460 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2864.1 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g51250.1 |
| Rice Genome Annotation | LOC_Os06g51250.1 |
| Ricechip | LOC_Os06g51250.1 |
| KEGG | osa:4342134 dosa:Os06t0728600-00 |
| Entrez-Gene | 4342134 |