RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g01020.1 View Network Show in Genome Browser |
| Other Names | Os07g0100200 |
| Description | SOR/SNZ family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 11572-12986 Nucleotide Length: 957 |
| Protein-coding | LOC_Os07g01020 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g03740 LOC_Os02g13140 LOC_Os03g56800 LOC_Os01g36930 LOC_Os02g50350 LOC_Os03g50880 LOC_Os01g16146 LOC_Os04g53210 LOC_Os03g57220 LOC_Os05g06350 LOC_Os01g14950 More.. |
| Downstream Genes | LOC_Os11g48080 LOC_Os10g01080 LOC_Os07g33850 LOC_Os11g01510 LOC_Os08g37874 LOC_Os08g04180 LOC_Os12g01520 LOC_Os07g05820 LOC_Os07g49230 LOC_Os10g41400 LOC_Os07g15880 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR171g |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g01020.1 |
| Rice Genome Annotation | LOC_Os07g01020.1 |
| Ricechip | LOC_Os07g01020.1 |
| KEGG | osa:4342162 dosa:Os07t0100200-01 |
| Entrez-Gene | 4342162 |