RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g01140.1 View Network Show in Genome Browser |
| Other Names | Os07g0101400 |
| Description | MBTB12 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 82397-85934 Nucleotide Length: 1188 |
| Protein-coding | LOC_Os07g01140 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g31100 LOC_Os01g56200 LOC_Os01g72020 LOC_Os02g39990 LOC_Os02g51180 LOC_Os06g46240 LOC_Os05g18770 LOC_Os05g23950 LOC_Os02g39290 LOC_Os04g14190 LOC_Os04g14110 More.. |
| Downstream Genes | LOC_Os12g06890 LOC_Os08g43060 LOC_Os12g02530 LOC_Os11g02610 LOC_Os12g30540 LOC_Os12g08070 LOC_Os11g36470 LOC_Os07g06950 LOC_Os07g23880 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g01140.1 |
| Rice Genome Annotation | LOC_Os07g01140.1 |
| Ricechip | LOC_Os07g01140.1 |
| KEGG | osa:4342170 dosa:Os07t0101400-01 |
| Entrez-Gene | 4342170 |