RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g01240.1 View Network Show in Genome Browser |
| Other Names | Os07g0102300 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 134162-143578 Nucleotide Length: 1101 |
| Protein-coding | LOC_Os07g01240 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g50860 |
| Downstream Genes | LOC_Os10g37520 LOC_Os08g43120 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5823 |
| Reference | |
|---|---|
| PubMed | 22715111 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g01240.1 |
| Rice Genome Annotation | LOC_Os07g01240.1 |
| Ricechip | LOC_Os07g01240.1 |
| KEGG | osa:4342175 dosa:Os07t0102300-01 |
| Entrez-Gene | 4342175 |