RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os07g01820.6 View Network Show in Genome Browser
Other Names	Os07g0108900
Description	OsMADS15 - MADS-box family gene with MIKCc type-box, expressed
Gene Attributes	Chromosome: Chr7 CDS Coordinates (5'-3'): 473290-477655 Nucleotide Length: 333
Protein-coding	LOC_Os07g01820

Gene Ontology Classification
GO	Name	Type	Code
GO:0009653	anatomical structure morphogenesis	Biological Process	IEA
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0030154	cell differentiation	Biological Process	IEA
GO:0009908	flower development	Biological Process	IEA
GO:0007275	multicellular organismal development	Biological Process	IEA
GO:0006139	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	Biological Process	IEA
GO:0003677	DNA binding	Molecular Function	IEA
GO:0005515	protein binding	Molecular Function	IEA
GO:0003700	sequence-specific DNA binding transcription factor activity	Molecular Function	IEA
GO:0005634	nucleus	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os02g52340 LOC_Os01g32750 LOC_Os01g69920 LOC_Os05g28010 LOC_Os04g33390 LOC_Os02g36924 LOC_Os06g11330 LOC_Os02g43920 LOC_Os02g49840 LOC_Os05g03830 LOC_Os03g08754 More..
Downstream Genes	LOC_Os12g37400 LOC_Os08g33488 LOC_Os11g29380 LOC_Os09g39260 LOC_Os09g39230 LOC_Os11g03430 LOC_Os12g03130 LOC_Os09g32948 LOC_Os08g41950 LOC_Os07g49390 LOC_Os11g10070 More..

Reference
PubMed	20107517 15144377 22570445

Database Links
Gramene	LOC_Os07g01820.6
Rice Genome Annotation	LOC_Os07g01820.6
Ricechip	LOC_Os07g01820.6
KEGG	osa:4342214 dosa:Os07t0108900-01
Entrez-Gene	4342214