RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g02030.1 View Network Show in Genome Browser |
| Other Names | Os07g0111301,Os07g0111100 |
| Description | thiamine pyrophosphate enzyme, N-terminal TPP binding domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 612503-619412 Nucleotide Length: 1215 |
| Protein-coding | LOC_Os07g02030 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g39570 LOC_Os04g55720 LOC_Os06g44460 LOC_Os06g29220 LOC_Os06g29180 |
| Downstream Genes | LOC_Os11g14950 LOC_Os08g34720 LOC_Os07g16040 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g02030.1 |
| Rice Genome Annotation | LOC_Os07g02030.1 |
| Ricechip | LOC_Os07g02030.1 |
| KEGG | dosa:Os07t0111100-01 |