RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g02210.3 View Network Show in Genome Browser |
| Other Names | Os07g0112800 |
| Description | eukaryotic translation initiation factor 5A, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 703017-705502 Nucleotide Length: 435 |
| Protein-coding | LOC_Os07g02210 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0008135 | translation factor activity, nucleic acid binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g34770 LOC_Os01g24690 LOC_Os03g08440 LOC_Os03g29170 LOC_Os03g37970 LOC_Os06g02510 LOC_Os05g26660 LOC_Os01g49290 LOC_Os01g04260 LOC_Os02g32120 LOC_Os04g42270 More.. |
| Downstream Genes | LOC_Os12g43670 LOC_Os08g43170 LOC_Os11g26850 LOC_Os09g07830 LOC_Os09g34960 LOC_Os07g42450 LOC_Os07g10660 LOC_Os07g40580 LOC_Os12g32240 LOC_Os09g15770 LOC_Os10g37420 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g02210.3 |
| Rice Genome Annotation | LOC_Os07g02210.3 |
| Ricechip | LOC_Os07g02210.3 |
| KEGG | osa:4342241 dosa:Os07t0112800-01 |
| Entrez-Gene | 4342241 |