RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g02350.1 View Network Show in Genome Browser |
| Other Names | Os07g0114400 |
| Description | casein kinase II subunit alpha-2, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 799478-805187 Nucleotide Length: 1002 |
| Protein-coding | LOC_Os07g02350 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g08970 LOC_Os05g08970 LOC_Os04g25550 LOC_Os06g08480 LOC_Os07g01880 LOC_Os02g47150 LOC_Os04g28090 LOC_Os03g21550 LOC_Os02g04160 LOC_Os05g48030 LOC_Os04g52960 More.. |
| Downstream Genes | LOC_Os10g41520 LOC_Os07g31280 LOC_Os08g06070 LOC_Os07g29360 LOC_Os12g38970 LOC_Os12g06910 LOC_Os08g31240 LOC_Os12g35030 LOC_Os07g32380 LOC_Os09g30412 LOC_Os09g30418 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g02350.1 |
| Rice Genome Annotation | LOC_Os07g02350.1 |
| Ricechip | LOC_Os07g02350.1 |
| KEGG | osa:4342248 dosa:Os07t0114400-01 |
| Entrez-Gene | 4342248 |