RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g02440.1 View Network Show in Genome Browser |
| Other Names | Os07g0115300 |
| Description | peroxidase precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 838070-841354 Nucleotide Length: 993 |
| Protein-coding | LOC_Os07g02440 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g15770 LOC_Os06g42120 LOC_Os02g38230 LOC_Os03g06200 LOC_Os04g44460 LOC_Os06g18000 LOC_Os06g47320 LOC_Os06g36700 LOC_Os05g05470 LOC_Os04g46620 LOC_Os02g22780 More.. |
| Downstream Genes | LOC_Os09g20090 LOC_Os12g32380 LOC_Os11g41610 LOC_Os10g37060 LOC_Os11g14010 LOC_Os12g39300 LOC_Os12g01060 LOC_Os11g01074 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00680 rn01100 rn01120 rn00360 rn00940 rn01110 |
| Metacyc Pathways | PWY-5461 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g02440.1 |
| Rice Genome Annotation | LOC_Os07g02440.1 |
| Ricechip | LOC_Os07g02440.1 |
| KEGG | osa:4342251 dosa:Os07t0115300-01 |
| Entrez-Gene | 4342251 |