RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g03160.1 View Network Show in Genome Browser |
| Other Names | Os07g0123700 |
| Description | WD domain, G-beta repeat domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 1228871-1238133 Nucleotide Length: 2271 |
| Protein-coding | LOC_Os07g03160 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g05730 LOC_Os05g27320 LOC_Os01g12880 LOC_Os02g08480 LOC_Os04g40870 LOC_Os03g02200 LOC_Os04g48770 LOC_Os01g56670 LOC_Os01g08200 LOC_Os05g03100 LOC_Os03g31400 More.. |
| Downstream Genes | LOC_Os10g30580 LOC_Os07g41090 LOC_Os11g18880 LOC_Os09g32020 LOC_Os11g09329 LOC_Os10g35290 LOC_Os12g30150 LOC_Os09g12710 LOC_Os07g06740 LOC_Os09g16380 LOC_Os12g06810 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g03160.1 |
| Rice Genome Annotation | LOC_Os07g03160.1 |
| Ricechip | LOC_Os07g03160.1 |
| KEGG | osa:4342300 dosa:Os07t0123700-00 |
| Entrez-Gene | 4342300 |