RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g03230.1 View Network Show in Genome Browser |
| Other Names | Os07g0124500 |
| Description | eukaryotic translation initiation factor 3 subunit C, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 1274555-1278738 Nucleotide Length: 2811 |
| Protein-coding | LOC_Os07g03230 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0008135 | translation factor activity, nucleic acid binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g03070 LOC_Os02g54700 LOC_Os05g16660 LOC_Os06g48350 LOC_Os05g51500 LOC_Os04g51630 LOC_Os02g54690 LOC_Os03g58430 LOC_Os06g02510 LOC_Os03g37970 LOC_Os03g05980 More.. |
| Downstream Genes | LOC_Os08g21660 LOC_Os10g41960 LOC_Os09g15770 LOC_Os12g41400 LOC_Os12g07740 LOC_Os07g12110 LOC_Os08g13690 LOC_Os07g08660 LOC_Os07g07250 LOC_Os12g05430 LOC_Os11g38959 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g03230.1 |
| Rice Genome Annotation | LOC_Os07g03230.1 |
| Ricechip | LOC_Os07g03230.1 |
| KEGG | osa:4342306 dosa:Os07t0124500-01 |
| Entrez-Gene | 4342306 |