RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g04160.1 View Network Show in Genome Browser |
| Other Names | Os07g0133700 |
| Description | peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 1777415-1780547 Nucleotide Length: 714 |
| Protein-coding | LOC_Os07g04160 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g73540 LOC_Os05g38370 LOC_Os02g52290 LOC_Os05g09400 LOC_Os04g50110 LOC_Os03g25140 LOC_Os06g20320 LOC_Os04g54320 LOC_Os01g40640 LOC_Os02g58020 LOC_Os03g32630 More.. |
| Downstream Genes | LOC_Os11g05090 LOC_Os12g05090 LOC_Os08g45010 LOC_Os09g39910 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g04160.1 |
| Rice Genome Annotation | LOC_Os07g04160.1 |
| Ricechip | LOC_Os07g04160.1 |
| KEGG | osa:4342342 dosa:Os07t0133700-01 |
| Entrez-Gene | 4342342 |