RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g04180.1 View Network Show in Genome Browser |
| Other Names | Os07g0134000 |
| Description | amino acid transporter, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 1788581-1794319 Nucleotide Length: 1464 |
| Protein-coding | LOC_Os07g04180 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os12g01360 LOC_Os11g01330 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5493 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g04180.1 |
| Rice Genome Annotation | LOC_Os07g04180.1 |
| Ricechip | LOC_Os07g04180.1 |
| KEGG | osa:4342343 dosa:Os07t0134000-02 |
| Entrez-Gene | 4342343 |