RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g04200.1 View Network Show in Genome Browser |
| Other Names | Os07g0134400 |
| Description | bacterial transferase hexapeptide domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 1832931-1835739 Nucleotide Length: 858 |
| Protein-coding | LOC_Os07g04200 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g36000 LOC_Os01g54900 LOC_Os05g45710 LOC_Os01g52400 LOC_Os01g63830 LOC_Os03g04140 LOC_Os03g38230 LOC_Os02g30460 LOC_Os01g18070 LOC_Os02g10260 LOC_Os06g23160 More.. |
| Downstream Genes | LOC_Os08g12840 LOC_Os12g07220 LOC_Os07g44840 LOC_Os11g05570 LOC_Os07g38300 LOC_Os12g35630 LOC_Os10g36470 LOC_Os10g17990 LOC_Os07g25410 LOC_Os08g25290 LOC_Os07g32590 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g04200.1 |
| Rice Genome Annotation | LOC_Os07g04200.1 |
| Ricechip | LOC_Os07g04200.1 |
| KEGG | osa:4342346 dosa:Os07t0134400-01 |
| Entrez-Gene | 4342346 |