RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g04550.1 View Network Show in Genome Browser |
| Other Names | Os07g0138100 |
| Description | pleckstrin homology domain-containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 2007647-2013146 Nucleotide Length: 1455 |
| Protein-coding | LOC_Os07g04550 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0008289 | lipid binding | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g06420 LOC_Os05g30880 LOC_Os05g34050 LOC_Os04g20270 LOC_Os05g05240 LOC_Os04g42490 LOC_Os04g55420 LOC_Os02g20850 LOC_Os04g52960 LOC_Os02g17910 LOC_Os02g58730 More.. |
| Downstream Genes | LOC_Os07g40710 LOC_Os07g16140 LOC_Os12g37570 LOC_Os08g02354 LOC_Os08g41850 LOC_Os07g47940 LOC_Os07g44950 LOC_Os07g23110 LOC_Os11g48090 |
| Reference | |
|---|---|
| PubMed | 22142166 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g04550.1 |
| Rice Genome Annotation | LOC_Os07g04550.1 |
| Ricechip | LOC_Os07g04550.1 |
| KEGG | osa:4342362 dosa:Os07t0138100-01 |
| Entrez-Gene | 4342362 |