RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g04690.2 View Network Show in Genome Browser |
| Other Names | Os07g0139400 |
| Description | UDP-arabinose 4-epimerase 1, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 2080296-2083532 Nucleotide Length: 1266 |
| Protein-coding | LOC_Os07g04690 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g51880 LOC_Os03g61710 LOC_Os02g04840 LOC_Os06g48940 LOC_Os02g36600 LOC_Os07g03170 LOC_Os04g38530 LOC_Os04g38540 |
| Downstream Genes | LOC_Os10g06720 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR444d.3 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g04690.2 |
| Rice Genome Annotation | LOC_Os07g04690.2 |
| Ricechip | LOC_Os07g04690.2 |
| KEGG | osa:4342364 dosa:Os07t0139400-01 |
| Entrez-Gene | 4342364 |