RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g04910.1 View Network Show in Genome Browser |
| Other Names | Os07g0142000 |
| Description | reticulon domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 2170638-2172892 Nucleotide Length: 741 |
| Protein-coding | LOC_Os07g04910 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g08720 LOC_Os02g06340 LOC_Os06g47330 LOC_Os04g57350 LOC_Os05g39050 LOC_Os05g38740 LOC_Os04g49420 LOC_Os03g02780 LOC_Os02g45940 LOC_Os01g61920 LOC_Os01g64280 More.. |
| Downstream Genes | LOC_Os10g39410 LOC_Os09g38020 LOC_Os09g26340 LOC_Os07g36500 LOC_Os08g18110 LOC_Os08g13030 LOC_Os08g12960 LOC_Os10g08840 LOC_Os08g13000 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g04910.1 |
| Rice Genome Annotation | LOC_Os07g04910.1 |
| Ricechip | LOC_Os07g04910.1 |
| KEGG | osa:4342374 dosa:Os07t0142000-01 |
| Entrez-Gene | 4342374 |